Human Gene DOK2 (uc003wzy.1)
  Description: Homo sapiens docking protein 2, 56kDa (DOK2), mRNA.
RefSeq Summary (NM_003974): The protein encoded by this gene is constitutively tyrosine phosphorylated in hematopoietic progenitors isolated from chronic myelogenous leukemia (CML) patients in the chronic phase. It may be a critical substrate for p210(bcr/abl), a chimeric protein whose presence is associated with CML. This encoded protein binds p120 (RasGAP) from CML cells. [provided by RefSeq, Jul 2008].
Transcript (Including UTRs)
   Position: hg19 chr8:21,766,384-21,771,205 Size: 4,822 Total Exon Count: 5 Strand: -
Coding Region
   Position: hg19 chr8:21,766,822-21,771,112 Size: 4,291 Coding Exon Count: 5 

Page IndexSequence and LinksUniProtKB CommentsPrimersGenetic AssociationsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr8:21,766,384-21,771,205)mRNA (may differ from genome)Protein (412 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
AlphaFoldBioGPSEnsemblEntrez GeneExonPrimerGeneCards
GeneNetworkH-INVHGNCHPRDLynxMGI
neXtProtOMIMPubMedReactomeTreefamUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: DOK2_HUMAN
DESCRIPTION: RecName: Full=Docking protein 2; AltName: Full=Downstream of tyrosine kinase 2; AltName: Full=p56(dok-2);
FUNCTION: DOK proteins are enzymatically inert adaptor or scaffolding proteins. They provide a docking platform for the assembly of multimolecular signaling complexes. DOK2 may modulate the cellular proliferation induced by IL-4, as well as IL-2 and IL-3. May be involved in modulating Bcr-Abl signaling. Attenuates EGF-stimulated MAP kinase activation (By similarity).
SUBUNIT: Interacts with phosphorylated RASGAP and EGFR. Interacts with RET and NCK. Interacts (via PH domain) with TEK/TIE2 (tyrosine phosphorylated) (By similarity).
TISSUE SPECIFICITY: Highly expressed in peripheral blood leukocytes, lymph nodes and spleen. Lower expression in thymus, bone marrow and fetal liver.
DOMAIN: PTB domain mediates receptor interaction.
PTM: On immunoreceptor stimulation, phosphorylated on C-terminal tyrosine residues. Phosphorylation on Tyr-345 is required for binding to the SH2 domain of NCK. Phosphorylation on both Tyr-271 and Tyr-299 is required for interaction with RASGAP. Phosphorylated on tyrosine residues by TEK/TIE2 (By similarity).
SIMILARITY: Belongs to the DOK family. Type A subfamily.
SIMILARITY: Contains 1 IRS-type PTB domain.
SIMILARITY: Contains 1 PH domain.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): DOK2
CDC HuGE Published Literature: DOK2

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 53.54 RPKM in Whole Blood
Total median expression: 208.68 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -20.8093-0.224 Picture PostScript Text
3' UTR -175.70438-0.401 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR002404 - Insln_rcpt_S1
IPR011993 - PH_like_dom
IPR001849 - Pleckstrin_homology

Pfam Domains:
PF02174 - PTB domain (IRS-1 type)

SCOP Domains:
50729 - PH domain-like

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2D9W - NMR MuPIT 2DLW - NMR MuPIT


ModBase Predicted Comparative 3D Structure on O60496
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologGenome BrowserGenome BrowserNo orthologNo ortholog
Gene Details  Gene Details  
Gene Sorter  Gene Sorter  
  EnsemblFlyBase  
  Protein SequenceProtein Sequence  
  AlignmentAlignment  

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0005057 signal transducer activity, downstream of receptor
GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity
GO:0005515 protein binding

Biological Process:
GO:0007165 signal transduction
GO:0007166 cell surface receptor signaling pathway
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007265 Ras protein signal transduction
GO:0007411 axon guidance
GO:0050900 leukocyte migration

Cellular Component:
GO:0005829 cytosol


-  Descriptions from all associated GenBank mRNAs
  DQ890550 - Synthetic construct clone IMAGE:100003180; FLH166528.01X; RZPDo839H1086D docking protein 2, 56kDa (DOK2) gene, encodes complete protein.
BC032623 - Homo sapiens docking protein 2, 56kDa, mRNA (cDNA clone MGC:45353 IMAGE:5242017), complete cds.
AK226110 - Homo sapiens mRNA for docking protein 2 isoform a variant, clone: ha01702.
AK296671 - Homo sapiens cDNA FLJ54269 complete cds, highly similar to Docking protein 2 (Downstream of tyrosine kinase 2).
AK292126 - Homo sapiens cDNA FLJ75779 complete cds, highly similar to Homo sapiens docking protein 2, 56kDa (DOK2), transcript variant 1, mRNA.
AF034970 - Homo sapiens docking protein (DOK-2) mRNA, complete cds.
KJ897952 - Synthetic construct Homo sapiens clone ccsbBroadEn_07346 DOK2 gene, encodes complete protein.
DQ896808 - Synthetic construct Homo sapiens clone IMAGE:100011268; FLH166524.01L; RZPDo839H1085D docking protein 2, 56kDa (DOK2) gene, encodes complete protein.
AB528923 - Synthetic construct DNA, clone: pF1KE0716, Homo sapiens DOK2 gene for docking protein 2, 56kDa, without stop codon, in Flexi system.
JD024694 - Sequence 5718 from Patent EP1572962.
JD029368 - Sequence 10392 from Patent EP1572962.
CU689448 - Synthetic construct Homo sapiens gateway clone IMAGE:100019280 5' read DOK2 mRNA.
JD022050 - Sequence 3074 from Patent EP1572962.
JD035906 - Sequence 16930 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein O60496 (Reactome details) participates in the following event(s):

R-HSA-204850 Interaction of Tie2 and Dok-2
R-HSA-8855617 2x p-5Y-RET:GDNF:GFRA complexes binds DOK1,DOK2,DOK4,DOK5,DOK6
R-HSA-210993 Tie2 Signaling
R-HSA-8853659 RET signaling
R-HSA-202733 Cell surface interactions at the vascular wall
R-HSA-422475 Axon guidance
R-HSA-109582 Hemostasis
R-HSA-1266738 Developmental Biology

-  Other Names for This Gene
  Alternate Gene Symbols: DOK2_HUMAN, NM_003974, NP_003965, O60496, Q8N5A4
UCSC ID: uc003wzy.1
RefSeq Accession: NM_003974
Protein: O60496 (aka DOK2_HUMAN)
CCDS: CCDS6016.1

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: NM_003974.2
exon count: 5CDS single in 3' UTR: no RNA size: 1870
ORF size: 1239CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 2630.00frame shift in genome: no % Coverage: 94.65
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 442# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.