Human Gene FLJ14346 (uc010zae.2) Description and Page Index
  Description: SubName: Full=Putative uncharacterized protein FLJ14346;
Transcript (Including UTRs)
   Position: hg19 chr2:130,940,898-130,942,576 Size: 1,679 Total Exon Count: 1 Strand: +
Coding Region
   Position: hg19 chr2:130,941,105-130,941,674 Size: 570 Coding Exon Count: 1 

Page IndexSequence and LinksGene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA Structure
Protein StructureOther SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:130,940,898-130,942,576)mRNA (may differ from genome)Protein (189 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaEnsemblExonPrimer
GeneCardsH-INVMGIPubMedStanford SOURCEUniProtKB

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.00 RPKM in Adipose - Subcutaneous
Total median expression: 0.00 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -90.00207-0.435 Picture PostScript Text
3' UTR -385.80902-0.428 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  ModBase Predicted Comparative 3D Structure on Q53SH9
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  LF385101 - JP 2014500723-A/192604: Polycomb-Associated Non-Coding RNAs.
AK024408 - Homo sapiens cDNA FLJ14346 fis, clone THYRO1001320.
BC017694 - Homo sapiens family with sequence similarity 128, member B, mRNA (cDNA clone IMAGE:4415420), with apparent retained intron.
MA620678 - JP 2018138019-A/192604: Polycomb-Associated Non-Coding RNAs.
JD229514 - Sequence 210538 from Patent EP1572962.
CU676018 - Synthetic construct Homo sapiens gateway clone IMAGE:100020223 5' read FAM128B mRNA.
HQ448337 - Synthetic construct Homo sapiens clone IMAGE:100071755; CCSB001043_02 family with sequence similarity 128, member B (FAM128B) gene, encodes complete protein.
KJ903275 - Synthetic construct Homo sapiens clone ccsbBroadEn_12669 MZT2B gene, encodes complete protein.
JD265293 - Sequence 246317 from Patent EP1572962.
JD296530 - Sequence 277554 from Patent EP1572962.
JD054305 - Sequence 35329 from Patent EP1572962.
JD438202 - Sequence 419226 from Patent EP1572962.
JD097547 - Sequence 78571 from Patent EP1572962.
JD214453 - Sequence 195477 from Patent EP1572962.
JD394887 - Sequence 375911 from Patent EP1572962.
JD230919 - Sequence 211943 from Patent EP1572962.
JD415403 - Sequence 396427 from Patent EP1572962.
JD151178 - Sequence 132202 from Patent EP1572962.
JD051519 - Sequence 32543 from Patent EP1572962.
JD370090 - Sequence 351114 from Patent EP1572962.
JD450958 - Sequence 431982 from Patent EP1572962.
JD101736 - Sequence 82760 from Patent EP1572962.
JD248605 - Sequence 229629 from Patent EP1572962.
JD453697 - Sequence 434721 from Patent EP1572962.
JD344420 - Sequence 325444 from Patent EP1572962.
JD162170 - Sequence 143194 from Patent EP1572962.
JD495772 - Sequence 476796 from Patent EP1572962.
JD115712 - Sequence 96736 from Patent EP1572962.
JD329316 - Sequence 310340 from Patent EP1572962.
JD533541 - Sequence 514565 from Patent EP1572962.
JD445889 - Sequence 426913 from Patent EP1572962.
JD276724 - Sequence 257748 from Patent EP1572962.
JD324349 - Sequence 305373 from Patent EP1572962.
JD324553 - Sequence 305577 from Patent EP1572962.
JD076898 - Sequence 57922 from Patent EP1572962.
JD332772 - Sequence 313796 from Patent EP1572962.
JD080875 - Sequence 61899 from Patent EP1572962.
JD491234 - Sequence 472258 from Patent EP1572962.
JD101829 - Sequence 82853 from Patent EP1572962.
JD214710 - Sequence 195734 from Patent EP1572962.
JD361932 - Sequence 342956 from Patent EP1572962.
JD044781 - Sequence 25805 from Patent EP1572962.
JD453660 - Sequence 434684 from Patent EP1572962.
JD222666 - Sequence 203690 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: hCG_1992149, HQ448337, Q53SH9, Q53SH9_HUMAN
UCSC ID: uc010zae.2
Representative RNA: HQ448337
Protein: Q53SH9

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: HQ448337.1
exon count: 1CDS single in 3' UTR: no RNA size: 687
ORF size: 570CDS single in intron: no Alignment % ID: 99.83
txCdsPredict score: 1226.00frame shift in genome: no % Coverage: 86.32
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.