Human Gene DNAH17-AS1 (uc031reo.1) Description and Page Index
  Description: Homo sapiens DNAH17 antisense RNA 1 (DNAH17-AS1), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr17:76,480,992-76,499,138 Size: 18,147 Total Exon Count: 6 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr17:76,480,992-76,499,138)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
Entrez GeneExonPrimerH-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 9.94 RPKM in Brain - Spinal cord (cervical c-1)
Total median expression: 14.94 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  JD106467 - Sequence 87491 from Patent EP1572962.
JD492590 - Sequence 473614 from Patent EP1572962.
JD339002 - Sequence 320026 from Patent EP1572962.
JD310225 - Sequence 291249 from Patent EP1572962.
JD126398 - Sequence 107422 from Patent EP1572962.
JD406258 - Sequence 387282 from Patent EP1572962.
JD159571 - Sequence 140595 from Patent EP1572962.
JD460362 - Sequence 441386 from Patent EP1572962.
JD353659 - Sequence 334683 from Patent EP1572962.
JD165078 - Sequence 146102 from Patent EP1572962.
JD296413 - Sequence 277437 from Patent EP1572962.
JD374022 - Sequence 355046 from Patent EP1572962.
JD226733 - Sequence 207757 from Patent EP1572962.
JD535299 - Sequence 516323 from Patent EP1572962.
JD370552 - Sequence 351576 from Patent EP1572962.
JD372221 - Sequence 353245 from Patent EP1572962.
AK127460 - Homo sapiens cDNA FLJ45552 fis, clone BRTHA2038279.
JD491162 - Sequence 472186 from Patent EP1572962.
JD138351 - Sequence 119375 from Patent EP1572962.
JD444587 - Sequence 425611 from Patent EP1572962.
JD460194 - Sequence 441218 from Patent EP1572962.
JD397631 - Sequence 378655 from Patent EP1572962.
JD253347 - Sequence 234371 from Patent EP1572962.
JD551270 - Sequence 532294 from Patent EP1572962.
JD071392 - Sequence 52416 from Patent EP1572962.
JD452983 - Sequence 434007 from Patent EP1572962.
JD435475 - Sequence 416499 from Patent EP1572962.
JD254795 - Sequence 235819 from Patent EP1572962.
BC014121 - Homo sapiens cDNA clone IMAGE:4551366, partial cds.
BC033171 - Homo sapiens, clone IMAGE:4551355, mRNA.
JD435569 - Sequence 416593 from Patent EP1572962.
JD039389 - Sequence 20413 from Patent EP1572962.
JD493254 - Sequence 474278 from Patent EP1572962.
JD163365 - Sequence 144389 from Patent EP1572962.
JD517219 - Sequence 498243 from Patent EP1572962.
JD044978 - Sequence 26002 from Patent EP1572962.
JD133994 - Sequence 115018 from Patent EP1572962.
JD525126 - Sequence 506150 from Patent EP1572962.
JD469409 - Sequence 450433 from Patent EP1572962.
JD200392 - Sequence 181416 from Patent EP1572962.
JD354299 - Sequence 335323 from Patent EP1572962.
JD063332 - Sequence 44356 from Patent EP1572962.
JD364892 - Sequence 345916 from Patent EP1572962.
JD496183 - Sequence 477207 from Patent EP1572962.
JD496184 - Sequence 477208 from Patent EP1572962.
JD185028 - Sequence 166052 from Patent EP1572962.
JD515881 - Sequence 496905 from Patent EP1572962.
JD375764 - Sequence 356788 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_102401, uc002jvt.1
UCSC ID: uc031reo.1
RefSeq Accession: NR_102401

-  Gene Model Information
 
category: antisense nonsense-mediated-decay: no RNA accession: NR_102401.1
exon count: 6CDS single in 3' UTR: no RNA size: 5163
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 479.50frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.