Human Gene LINC00323 (uc002yyv.1) Description and Page Index
  Description: Homo sapiens long intergenic non-protein coding RNA 323 (LINC00323), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr21:42,513,427-42,519,991 Size: 6,565 Total Exon Count: 2 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr21:42,513,427-42,519,991)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerGeneNetworkH-INV
HGNCLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 19.45 RPKM in Brain - Spinal cord (cervical c-1)
Total median expression: 32.21 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  JD372629 - Sequence 353653 from Patent EP1572962.
AK094492 - Homo sapiens cDNA FLJ37173 fis, clone BRACE2028392.
JD175327 - Sequence 156351 from Patent EP1572962.
JD531335 - Sequence 512359 from Patent EP1572962.
JD304968 - Sequence 285992 from Patent EP1572962.
JD302664 - Sequence 283688 from Patent EP1572962.
JD360211 - Sequence 341235 from Patent EP1572962.
JD309337 - Sequence 290361 from Patent EP1572962.
JD089748 - Sequence 70772 from Patent EP1572962.
JD553726 - Sequence 534750 from Patent EP1572962.
JD298692 - Sequence 279716 from Patent EP1572962.
JD375616 - Sequence 356640 from Patent EP1572962.
JD139827 - Sequence 120851 from Patent EP1572962.
JD196244 - Sequence 177268 from Patent EP1572962.
JD097103 - Sequence 78127 from Patent EP1572962.
JD470643 - Sequence 451667 from Patent EP1572962.
JD368380 - Sequence 349404 from Patent EP1572962.
JD208210 - Sequence 189234 from Patent EP1572962.
JD150617 - Sequence 131641 from Patent EP1572962.
JD334581 - Sequence 315605 from Patent EP1572962.
JD174386 - Sequence 155410 from Patent EP1572962.
JD399297 - Sequence 380321 from Patent EP1572962.
JD254185 - Sequence 235209 from Patent EP1572962.
JD150057 - Sequence 131081 from Patent EP1572962.
JD377319 - Sequence 358343 from Patent EP1572962.
JD253973 - Sequence 234997 from Patent EP1572962.
JD449359 - Sequence 430383 from Patent EP1572962.
JD081358 - Sequence 62382 from Patent EP1572962.
JD470905 - Sequence 451929 from Patent EP1572962.
JD359472 - Sequence 340496 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_024100
UCSC ID: uc002yyv.1
RefSeq Accession: NR_024100

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_024100.1
exon count: 2CDS single in 3' UTR: no RNA size: 2019
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 575.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.