Human Gene L32131 (uc002iyr.1)
  Description: Homo sapiens cDNA FLJ33664 fis, clone BRAMY2027451, moderately similar to 60S RIBOSOMAL PROTEIN L12.
Transcript (Including UTRs)
   Position: hg19 chr17:58,511,039-58,513,357 Size: 2,319 Total Exon Count: 1 Strand: -


Page IndexSequence and LinksPrimersRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr17:58,511,039-58,513,357)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaEnsemblExonPrimer
H-INVPubMed

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.59 RPKM in Testis
Total median expression: 1.34 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK090983 - Homo sapiens cDNA FLJ33664 fis, clone BRAMY2027451, moderately similar to 60S RIBOSOMAL PROTEIN L12.
AX746718 - Sequence 243 from Patent EP1308459.
JD243777 - Sequence 224801 from Patent EP1572962.
JD246147 - Sequence 227171 from Patent EP1572962.
JD451925 - Sequence 432949 from Patent EP1572962.
JD424840 - Sequence 405864 from Patent EP1572962.
JD104872 - Sequence 85896 from Patent EP1572962.
JD298796 - Sequence 279820 from Patent EP1572962.
JD471836 - Sequence 452860 from Patent EP1572962.
JD433644 - Sequence 414668 from Patent EP1572962.
JD082361 - Sequence 63385 from Patent EP1572962.
JD088014 - Sequence 69038 from Patent EP1572962.
JD288657 - Sequence 269681 from Patent EP1572962.
L32131 - Homo sapiens (clone XP2E8B) mRNA, partial cds.
JD409743 - Sequence 390767 from Patent EP1572962.
JD489347 - Sequence 470371 from Patent EP1572962.
JD549664 - Sequence 530688 from Patent EP1572962.
JD556692 - Sequence 537716 from Patent EP1572962.
JD227144 - Sequence 208168 from Patent EP1572962.
JD244133 - Sequence 225157 from Patent EP1572962.
JD553317 - Sequence 534341 from Patent EP1572962.
JD296492 - Sequence 277516 from Patent EP1572962.
JD427160 - Sequence 408184 from Patent EP1572962.
JD465840 - Sequence 446864 from Patent EP1572962.
JD182782 - Sequence 163806 from Patent EP1572962.
JD359991 - Sequence 341015 from Patent EP1572962.
JD436546 - Sequence 417570 from Patent EP1572962.
JD170504 - Sequence 151528 from Patent EP1572962.
JD170503 - Sequence 151527 from Patent EP1572962.
JD440656 - Sequence 421680 from Patent EP1572962.
JD490034 - Sequence 471058 from Patent EP1572962.
JD058204 - Sequence 39228 from Patent EP1572962.
JD471147 - Sequence 452171 from Patent EP1572962.
JD250692 - Sequence 231716 from Patent EP1572962.
JD147544 - Sequence 128568 from Patent EP1572962.
JD055433 - Sequence 36457 from Patent EP1572962.
JD451873 - Sequence 432897 from Patent EP1572962.
JD392606 - Sequence 373630 from Patent EP1572962.
JD260959 - Sequence 241983 from Patent EP1572962.
JD052492 - Sequence 33516 from Patent EP1572962.
JD351508 - Sequence 332532 from Patent EP1572962.
JD049186 - Sequence 30210 from Patent EP1572962.
JD290508 - Sequence 271532 from Patent EP1572962.
JD560622 - Sequence 541646 from Patent EP1572962.
JD402719 - Sequence 383743 from Patent EP1572962.
JD517141 - Sequence 498165 from Patent EP1572962.
JD079263 - Sequence 60287 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc002iyr.1
Representative RNA: L32131

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: L32131.1
exon count: 1CDS single in 3' UTR: no RNA size: 26
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 450.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 22
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.