Human Gene LINC00538 (uc031psb.1) Description and Page Index
  Description: Homo sapiens long intergenic non-protein coding RNA 538 (LINC00538), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr1:214,098,092-214,099,996 Size: 1,905 Total Exon Count: 1 Strand: +


Page IndexSequence and LinksOther SpeciesmRNA DescriptionsOther NamesModel Information
Methods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:214,098,092-214,099,996)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEntrez GeneExonPrimerHGNCLynxOMIM
PubMedStanford SOURCE

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  JF495099 - Homo sapiens cell-line HEK293 Yiya non-coding RNA, complete sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_046189
UCSC ID: uc031psb.1
RefSeq Accession: NR_046189

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_046189.1
exon count: 1CDS single in 3' UTR: no RNA size: 1906
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 269.00frame shift in genome: no % Coverage: 99.95
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.