Human Gene DQ574721 (uc021tmw.1) Description and Page Index
  Description: Homo sapiens cDNA FLJ39761 fis, clone SPLEN1000083.
Transcript (Including UTRs)
   Position: hg19 chr16:90,237,092-90,238,407 Size: 1,316 Total Exon Count: 1 Strand: +


Page IndexSequence and LinksOther SpeciesmRNA DescriptionsOther NamesModel Information
Methods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:90,237,092-90,238,407)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaExonPrimerPubMed
Stanford SOURCE

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC054485 - Homo sapiens cDNA clone IMAGE:5764174, partial cds.
JD408642 - Sequence 389666 from Patent EP1572962.
JD165493 - Sequence 146517 from Patent EP1572962.
JD425043 - Sequence 406067 from Patent EP1572962.
JD149222 - Sequence 130246 from Patent EP1572962.
JD104899 - Sequence 85923 from Patent EP1572962.
JD346293 - Sequence 327317 from Patent EP1572962.
JD368021 - Sequence 349045 from Patent EP1572962.
JD343471 - Sequence 324495 from Patent EP1572962.
DQ578983 - Homo sapiens piRNA piR-47095, complete sequence.
JD466057 - Sequence 447081 from Patent EP1572962.
JD421055 - Sequence 402079 from Patent EP1572962.
JD421056 - Sequence 402080 from Patent EP1572962.
JD562401 - Sequence 543425 from Patent EP1572962.
JD205899 - Sequence 186923 from Patent EP1572962.
JD373121 - Sequence 354145 from Patent EP1572962.
JD168783 - Sequence 149807 from Patent EP1572962.
JD168782 - Sequence 149806 from Patent EP1572962.
JD425470 - Sequence 406494 from Patent EP1572962.
JD481125 - Sequence 462149 from Patent EP1572962.
JD471666 - Sequence 452690 from Patent EP1572962.
JD075478 - Sequence 56502 from Patent EP1572962.
JD442677 - Sequence 423701 from Patent EP1572962.
JD105113 - Sequence 86137 from Patent EP1572962.
JD398278 - Sequence 379302 from Patent EP1572962.
JD525721 - Sequence 506745 from Patent EP1572962.
DQ575009 - Homo sapiens piRNA piR-43121, complete sequence.
DQ575010 - Homo sapiens piRNA piR-43122, complete sequence.
DQ575011 - Homo sapiens piRNA piR-43123, complete sequence.
JD058230 - Sequence 39254 from Patent EP1572962.
JD167495 - Sequence 148519 from Patent EP1572962.
JD135384 - Sequence 116408 from Patent EP1572962.
DQ589850 - Homo sapiens piRNA piR-56962, complete sequence.
JD554961 - Sequence 535985 from Patent EP1572962.
JD210002 - Sequence 191026 from Patent EP1572962.
JD147592 - Sequence 128616 from Patent EP1572962.
JD140077 - Sequence 121101 from Patent EP1572962.
JD100883 - Sequence 81907 from Patent EP1572962.
JD100884 - Sequence 81908 from Patent EP1572962.
JD409668 - Sequence 390692 from Patent EP1572962.
JD409667 - Sequence 390691 from Patent EP1572962.
JD149672 - Sequence 130696 from Patent EP1572962.
JD383983 - Sequence 365007 from Patent EP1572962.
JD456514 - Sequence 437538 from Patent EP1572962.
JD456513 - Sequence 437537 from Patent EP1572962.
JD362617 - Sequence 343641 from Patent EP1572962.
JD132791 - Sequence 113815 from Patent EP1572962.
DQ574721 - Homo sapiens piRNA piR-42833, complete sequence.
JD118881 - Sequence 99905 from Patent EP1572962.
JD107109 - Sequence 88133 from Patent EP1572962.
JD395654 - Sequence 376678 from Patent EP1572962.
JD250139 - Sequence 231163 from Patent EP1572962.
JD462574 - Sequence 443598 from Patent EP1572962.
JD497447 - Sequence 478471 from Patent EP1572962.
JD252484 - Sequence 233508 from Patent EP1572962.
JD389975 - Sequence 370999 from Patent EP1572962.
JD167365 - Sequence 148389 from Patent EP1572962.
JD292746 - Sequence 273770 from Patent EP1572962.
JD422540 - Sequence 403564 from Patent EP1572962.
JD459811 - Sequence 440835 from Patent EP1572962.
JD317624 - Sequence 298648 from Patent EP1572962.
JD526152 - Sequence 507176 from Patent EP1572962.
JD151824 - Sequence 132848 from Patent EP1572962.
JD151036 - Sequence 132060 from Patent EP1572962.
JD337898 - Sequence 318922 from Patent EP1572962.
JD058198 - Sequence 39222 from Patent EP1572962.
JD390248 - Sequence 371272 from Patent EP1572962.
JD390247 - Sequence 371271 from Patent EP1572962.
JD402400 - Sequence 383424 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc021tmw.1
Representative RNA: DQ574721

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: DQ574721.1
exon count: 1CDS single in 3' UTR: no RNA size: 26
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 398.00frame shift in genome: no % Coverage: 96.15
has start codon: no stop codon in genome: no # of Alignments: 26
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.