Human Gene LOC400548 (uc021tmb.1) Description and Page Index
  Description: Homo sapiens uncharacterized LOC400548 (LOC400548), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr16:85,170,756-85,183,049 Size: 12,294 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksOther SpeciesmRNA DescriptionsOther NamesModel Information
Methods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:85,170,756-85,183,049)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
Entrez GeneExonPrimerLynxPubMedStanford SOURCE

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC040918 - Homo sapiens hypothetical gene supported by BC040918, mRNA (cDNA clone IMAGE:5750080).
JD482281 - Sequence 463305 from Patent EP1572962.
JD207149 - Sequence 188173 from Patent EP1572962.
JD210081 - Sequence 191105 from Patent EP1572962.
JD457668 - Sequence 438692 from Patent EP1572962.
JD122170 - Sequence 103194 from Patent EP1572962.
JD229305 - Sequence 210329 from Patent EP1572962.
JD095123 - Sequence 76147 from Patent EP1572962.
JD123655 - Sequence 104679 from Patent EP1572962.
JD437983 - Sequence 419007 from Patent EP1572962.
JD369639 - Sequence 350663 from Patent EP1572962.
JD360333 - Sequence 341357 from Patent EP1572962.
JD089895 - Sequence 70919 from Patent EP1572962.
JD280738 - Sequence 261762 from Patent EP1572962.
JD241970 - Sequence 222994 from Patent EP1572962.
JD341688 - Sequence 322712 from Patent EP1572962.
JD479172 - Sequence 460196 from Patent EP1572962.
JD323120 - Sequence 304144 from Patent EP1572962.
JD396168 - Sequence 377192 from Patent EP1572962.
JD070273 - Sequence 51297 from Patent EP1572962.
JD416381 - Sequence 397405 from Patent EP1572962.
JD424950 - Sequence 405974 from Patent EP1572962.
JD059868 - Sequence 40892 from Patent EP1572962.
JD156413 - Sequence 137437 from Patent EP1572962.
JD552334 - Sequence 533358 from Patent EP1572962.
JD297395 - Sequence 278419 from Patent EP1572962.
JD516304 - Sequence 497328 from Patent EP1572962.
JD074173 - Sequence 55197 from Patent EP1572962.
JD106918 - Sequence 87942 from Patent EP1572962.
JD475703 - Sequence 456727 from Patent EP1572962.
JD350144 - Sequence 331168 from Patent EP1572962.
JD179354 - Sequence 160378 from Patent EP1572962.
JD381031 - Sequence 362055 from Patent EP1572962.
JD264289 - Sequence 245313 from Patent EP1572962.
JD144753 - Sequence 125777 from Patent EP1572962.
JD495946 - Sequence 476970 from Patent EP1572962.
JD430478 - Sequence 411502 from Patent EP1572962.
JD529711 - Sequence 510735 from Patent EP1572962.
JD529712 - Sequence 510736 from Patent EP1572962.
JD434921 - Sequence 415945 from Patent EP1572962.
JD434922 - Sequence 415946 from Patent EP1572962.
JD434923 - Sequence 415947 from Patent EP1572962.
JD307092 - Sequence 288116 from Patent EP1572962.
JD307093 - Sequence 288117 from Patent EP1572962.
JD322972 - Sequence 303996 from Patent EP1572962.
JD401644 - Sequence 382668 from Patent EP1572962.
JD401645 - Sequence 382669 from Patent EP1572962.
JD401647 - Sequence 382671 from Patent EP1572962.
JD425085 - Sequence 406109 from Patent EP1572962.
JD332331 - Sequence 313355 from Patent EP1572962.
JD448314 - Sequence 429338 from Patent EP1572962.
JD351717 - Sequence 332741 from Patent EP1572962.
JD523393 - Sequence 504417 from Patent EP1572962.
JD406726 - Sequence 387750 from Patent EP1572962.
JD387267 - Sequence 368291 from Patent EP1572962.
JD496470 - Sequence 477494 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_033984
UCSC ID: uc021tmb.1
RefSeq Accession: NR_033984

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_033984.1
exon count: 3CDS single in 3' UTR: no RNA size: 2015
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 483.50frame shift in genome: no % Coverage: 99.50
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.