Human Gene FLJ30679 (uc010vos.1) Description and Page Index
  Description: Homo sapiens uncharacterized protein FLJ30679 (FLJ30679), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr16:86,588,926-86,590,905 Size: 1,980 Total Exon Count: 1 Strand: +
Coding Region
   Position: hg19 chr16:86,588,952-86,589,344 Size: 393 Coding Exon Count: 1 

Page IndexSequence and LinksGene AllelesRNA StructureOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:86,588,926-86,590,905)mRNA (may differ from genome)Protein (130 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
Entrez GeneExonPrimerGeneCardsH-INVLynxMGI
PubMedStanford SOURCE

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -4.6026-0.177 Picture PostScript Text
3' UTR -484.731561-0.311 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK055241 - Homo sapiens cDNA FLJ30679 fis, clone FCBBF2000105.
JD058351 - Sequence 39375 from Patent EP1572962.
JD436111 - Sequence 417135 from Patent EP1572962.
JD328827 - Sequence 309851 from Patent EP1572962.
JD054585 - Sequence 35609 from Patent EP1572962.
JD365413 - Sequence 346437 from Patent EP1572962.
DQ597059 - Homo sapiens piRNA piR-35125, complete sequence.
JD175784 - Sequence 156808 from Patent EP1572962.
DQ599168 - Homo sapiens piRNA piR-37234, complete sequence.
JD230974 - Sequence 211998 from Patent EP1572962.
JD208218 - Sequence 189242 from Patent EP1572962.
JD520992 - Sequence 502016 from Patent EP1572962.
JD062545 - Sequence 43569 from Patent EP1572962.
JD325649 - Sequence 306673 from Patent EP1572962.
JD083571 - Sequence 64595 from Patent EP1572962.
JD348904 - Sequence 329928 from Patent EP1572962.
JD069621 - Sequence 50645 from Patent EP1572962.
JD147935 - Sequence 128959 from Patent EP1572962.
JD500870 - Sequence 481894 from Patent EP1572962.
JD283030 - Sequence 264054 from Patent EP1572962.
JD548649 - Sequence 529673 from Patent EP1572962.
JD378496 - Sequence 359520 from Patent EP1572962.
JD074250 - Sequence 55274 from Patent EP1572962.
JD503767 - Sequence 484791 from Patent EP1572962.
JD450651 - Sequence 431675 from Patent EP1572962.
JD208441 - Sequence 189465 from Patent EP1572962.
JD188381 - Sequence 169405 from Patent EP1572962.
JD521680 - Sequence 502704 from Patent EP1572962.
JD077573 - Sequence 58597 from Patent EP1572962.
JD485800 - Sequence 466824 from Patent EP1572962.
JD509243 - Sequence 490267 from Patent EP1572962.
JD238852 - Sequence 219876 from Patent EP1572962.
JD313937 - Sequence 294961 from Patent EP1572962.
JD048916 - Sequence 29940 from Patent EP1572962.
JD498868 - Sequence 479892 from Patent EP1572962.
JD130867 - Sequence 111891 from Patent EP1572962.
JD545294 - Sequence 526318 from Patent EP1572962.
JD050730 - Sequence 31754 from Patent EP1572962.
JD286085 - Sequence 267109 from Patent EP1572962.
JD243987 - Sequence 225011 from Patent EP1572962.
JD089732 - Sequence 70756 from Patent EP1572962.
JD089733 - Sequence 70757 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_026674
UCSC ID: uc010vos.1
RefSeq Accession: NR_026674

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: NR_026674.1
exon count: 1CDS single in 3' UTR: no RNA size: 1980
ORF size: 393CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 797.00frame shift in genome: no % Coverage: 100.00
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.