Human Gene FAM71A (uc010pth.1) Description and Page Index
  Description: Homo sapiens cDNA FLJ40118 fis, clone TESTI2009412.
Transcript (Including UTRs)
   Position: hg19 chr1:212,797,626-212,800,113 Size: 2,488 Total Exon Count: 2 Strand: -


Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:212,797,626-212,800,113)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPEnsembl
ExonPrimerH-INVHGNCLynxPubMedStanford SOURCE

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 84.93 RPKM in Testis
Total median expression: 86.26 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK097437 - Homo sapiens cDNA FLJ40118 fis, clone TESTI2009412.
CU690021 - Synthetic construct Homo sapiens gateway clone IMAGE:100018370 3' read FAM71A mRNA.

-  Other Names for This Gene
  Alternate Gene Symbols: AK097437
UCSC ID: uc010pth.1
Representative RNA: AK097437

-  Gene Model Information
 
category: antisense nonsense-mediated-decay: yes RNA accession: AK097437.1
exon count: 2CDS single in 3' UTR: no RNA size: 2225
ORF size: 0CDS single in intron: no Alignment % ID: 99.78
txCdsPredict score: 1010.00frame shift in genome: no % Coverage: 100.00
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.