Human Gene LOC100130301 (uc010lzi.1) Description and Page Index
  Description: Homo sapiens uncharacterized LOC100130301 (LOC100130301), mRNA.
Transcript (Including UTRs)
   Position: hg19 chr8:74,153,659-74,171,737 Size: 18,079 Total Exon Count: 4 Strand: -
Coding Region
   Position: hg19 chr8:74,162,544-74,171,693 Size: 9,150 Coding Exon Count: 3 

Page IndexSequence and LinksGene AllelesRNA StructureOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr8:74,153,659-74,171,737)mRNA (may differ from genome)Protein (75 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
CGAPExonPrimerGeneCardsLynxMGIPubMed
Stanford SOURCE

+  Common Gene Haplotype Alleles
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -4.9044-0.111 Picture PostScript Text
3' UTR -56.20223-0.252 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene Details     
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-  Descriptions from all associated GenBank mRNAs
  BC150551 - Homo sapiens cDNA clone IMAGE:40127472.
BC150552 - Homo sapiens cDNA clone IMAGE:40127473.

-  Other Names for This Gene
  Alternate Gene Symbols: BC150551
UCSC ID: uc010lzi.1
RefSeq Accession: NM_001243237

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: BC150551.1
exon count: 4CDS single in 3' UTR: no RNA size: 495
ORF size: 228CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 656.00frame shift in genome: no % Coverage: 100.00
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.