Human Gene AX747598 (uc002fqr.2) Description and Page Index
  Description: Homo sapiens cDNA FLJ35239 fis, clone PROST2002212.
Transcript (Including UTRs)
   Position: hg19 chr16:90,168,702-90,204,399 Size: 35,698 Total Exon Count: 9 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:90,168,702-90,204,399)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaEnsemblExonPrimer
H-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 9.88 RPKM in Whole Blood
Total median expression: 47.77 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK092558 - Homo sapiens cDNA FLJ35239 fis, clone PROST2002212.
AX747598 - Sequence 1123 from Patent EP1308459.
JD566547 - Sequence 547571 from Patent EP1572962.
JD074128 - Sequence 55152 from Patent EP1572962.
JD434591 - Sequence 415615 from Patent EP1572962.
DQ591466 - Homo sapiens piRNA piR-58578, complete sequence.
JD189315 - Sequence 170339 from Patent EP1572962.
JD328936 - Sequence 309960 from Patent EP1572962.
JD380286 - Sequence 361310 from Patent EP1572962.
JD095449 - Sequence 76473 from Patent EP1572962.
JD106301 - Sequence 87325 from Patent EP1572962.
JD313788 - Sequence 294812 from Patent EP1572962.
JD159302 - Sequence 140326 from Patent EP1572962.
JD133217 - Sequence 114241 from Patent EP1572962.
JD422142 - Sequence 403166 from Patent EP1572962.
JD504690 - Sequence 485714 from Patent EP1572962.
JD365965 - Sequence 346989 from Patent EP1572962.
JD365964 - Sequence 346988 from Patent EP1572962.
JD385758 - Sequence 366782 from Patent EP1572962.
JD385759 - Sequence 366783 from Patent EP1572962.
JD110982 - Sequence 92006 from Patent EP1572962.
DQ577244 - Homo sapiens piRNA piR-45356, complete sequence.
DQ590643 - Homo sapiens piRNA piR-57755, complete sequence.
JD558610 - Sequence 539634 from Patent EP1572962.
JD326078 - Sequence 307102 from Patent EP1572962.
JD153798 - Sequence 134822 from Patent EP1572962.
JD528515 - Sequence 509539 from Patent EP1572962.
JD553006 - Sequence 534030 from Patent EP1572962.
JD523085 - Sequence 504109 from Patent EP1572962.
JD367511 - Sequence 348535 from Patent EP1572962.
JD306871 - Sequence 287895 from Patent EP1572962.
JD322259 - Sequence 303283 from Patent EP1572962.
JD426712 - Sequence 407736 from Patent EP1572962.
JD551893 - Sequence 532917 from Patent EP1572962.
JD070016 - Sequence 51040 from Patent EP1572962.
JD243636 - Sequence 224660 from Patent EP1572962.
JD243635 - Sequence 224659 from Patent EP1572962.
JD205276 - Sequence 186300 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc002fqr.2
Representative RNA: AX747598

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: AX747598.1
exon count: 9CDS single in 3' UTR: no RNA size: 1991
ORF size: 0CDS single in intron: no Alignment % ID: 99.78
txCdsPredict score: 244.00frame shift in genome: no % Coverage: 89.30
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.