Human Gene DBNDD1 (uc002fqg.1) Description and Page Index
  Description: Homo sapiens dysbindin (dystrobrevin binding protein 1) domain containing 1 (DBNDD1), transcript variant 2, mRNA.
Transcript (Including UTRs)
   Position: hg19 chr16:90,071,279-90,086,328 Size: 15,050 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksGenetic AssociationsCTDRNA-Seq ExpressionMicroarray Expression
Other SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:90,071,279-90,086,328)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
CGAPEnsemblExonPrimerGeneNetworkH-INVHGNC
LynxPubMedStanford SOURCETreefam

-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): DBNDD1
CDC HuGE Published Literature: DBNDD1
Positive Disease Associations: Suntan
Related Studies:
  1. Suntan
    Hongmei Nan et al. The Journal of investigative dermatology 2009, Genome-wide association study of tanning phenotype in a population of European ancestry., The Journal of investigative dermatology. [PubMed 19340012]

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 42.76 RPKM in Brain - Cortex
Total median expression: 367.72 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AL713678 - Homo sapiens mRNA; cDNA DKFZp761L2416 (from clone DKFZp761L2416).
BC000700 - Homo sapiens dysbindin (dystrobrevin binding protein 1) domain containing 1, mRNA (cDNA clone MGC:3101 IMAGE:3350198), complete cds.
AK096507 - Homo sapiens cDNA FLJ39188 fis, clone OCBBF2004567.
AK090965 - Homo sapiens cDNA FLJ33646 fis, clone BRAMY2024312.
AX746707 - Sequence 232 from Patent EP1308459.
AK022644 - Homo sapiens cDNA FLJ12582 fis, clone NT2RM4001151.
AK090696 - Homo sapiens cDNA FLJ33377 fis, clone BRACE2006258.
AX746579 - Sequence 104 from Patent EP1308459.
JD402511 - Sequence 383535 from Patent EP1572962.
JD253948 - Sequence 234972 from Patent EP1572962.
JD163968 - Sequence 144992 from Patent EP1572962.
JD455598 - Sequence 436622 from Patent EP1572962.
JD209061 - Sequence 190085 from Patent EP1572962.
JD343608 - Sequence 324632 from Patent EP1572962.
JD456909 - Sequence 437933 from Patent EP1572962.
JD424160 - Sequence 405184 from Patent EP1572962.
JD151459 - Sequence 132483 from Patent EP1572962.
JD151155 - Sequence 132179 from Patent EP1572962.
JD326755 - Sequence 307779 from Patent EP1572962.
JD368590 - Sequence 349614 from Patent EP1572962.
JD426061 - Sequence 407085 from Patent EP1572962.
JD399544 - Sequence 380568 from Patent EP1572962.
JD123063 - Sequence 104087 from Patent EP1572962.
JD286347 - Sequence 267371 from Patent EP1572962.
JD437060 - Sequence 418084 from Patent EP1572962.
JD190739 - Sequence 171763 from Patent EP1572962.
JD423805 - Sequence 404829 from Patent EP1572962.
JD340265 - Sequence 321289 from Patent EP1572962.
JD118234 - Sequence 99258 from Patent EP1572962.
JD386507 - Sequence 367531 from Patent EP1572962.
JD211960 - Sequence 192984 from Patent EP1572962.
JD290824 - Sequence 271848 from Patent EP1572962.
JD326992 - Sequence 308016 from Patent EP1572962.
JD061652 - Sequence 42676 from Patent EP1572962.
JD045092 - Sequence 26116 from Patent EP1572962.
JD397496 - Sequence 378520 from Patent EP1572962.
JD336740 - Sequence 317764 from Patent EP1572962.
JD090482 - Sequence 71506 from Patent EP1572962.
JD102654 - Sequence 83678 from Patent EP1572962.
JD371101 - Sequence 352125 from Patent EP1572962.
AK308737 - Homo sapiens cDNA, FLJ98778.
JD218802 - Sequence 199826 from Patent EP1572962.
JD165581 - Sequence 146605 from Patent EP1572962.
JD355285 - Sequence 336309 from Patent EP1572962.
JD492318 - Sequence 473342 from Patent EP1572962.
JD195236 - Sequence 176260 from Patent EP1572962.
JD394767 - Sequence 375791 from Patent EP1572962.
JD441576 - Sequence 422600 from Patent EP1572962.
JD050313 - Sequence 31337 from Patent EP1572962.
AK298932 - Homo sapiens cDNA FLJ59960 complete cds.
JD520179 - Sequence 501203 from Patent EP1572962.
JD123746 - Sequence 104770 from Patent EP1572962.
JD041041 - Sequence 22065 from Patent EP1572962.
JD162588 - Sequence 143612 from Patent EP1572962.
KJ894627 - Synthetic construct Homo sapiens clone ccsbBroadEn_04021 DBNDD1 gene, encodes complete protein.
LF208353 - JP 2014500723-A/15856: Polycomb-Associated Non-Coding RNAs.
LF375202 - JP 2014500723-A/182705: Polycomb-Associated Non-Coding RNAs.
LF212255 - JP 2014500723-A/19758: Polycomb-Associated Non-Coding RNAs.
BC036781 - Homo sapiens, clone IMAGE:5725898, mRNA.
MA443930 - JP 2018138019-A/15856: Polycomb-Associated Non-Coding RNAs.
MA610779 - JP 2018138019-A/182705: Polycomb-Associated Non-Coding RNAs.
MA447832 - JP 2018138019-A/19758: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: AK308737
UCSC ID: uc002fqg.1
RefSeq Accession: NM_024043

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: no RNA accession: AK308737.1
exon count: 4CDS single in 3' UTR: no RNA size: 917
ORF size: 0CDS single in intron: no Alignment % ID: 99.89
txCdsPredict score: 572.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.