Human Gene PTPRZ1 (ENST00000651842.1) from GENCODE V41
Description: protein tyrosine phosphatase, receptor type Z1 (from HGNC PTPRZ1) RefSeq Summary (NM_002851): This gene encodes a member of the receptor protein tyrosine phosphatase family. Expression of this gene is restricted to the central nervous system (CNS), and it may be involved in the regulation of specific developmental processes in the CNS. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, May 2011]. Gencode Transcript: ENST00000651842.1 Gencode Gene: ENSG00000106278.12 Transcript (Including UTRs) Position: hg38 chr7:121,873,166-122,061,828 Size: 188,663 Total Exon Count: 32 Strand: + Coding Region Position: hg38 chr7:121,873,500-122,061,220 Size: 187,721 Coding Exon Count: 32
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.