Human Gene FAM92A (ENST00000620645.1) Description and Page Index
  Description: family with sequence similarity 92 member A (from HGNC FAM92A)
Gencode Transcript: ENST00000620645.1
Gencode Gene: ENSG00000188343.13
Transcript (Including UTRs)
   Position: hg38 chr8:93,700,593-93,728,389 Size: 27,797 Total Exon Count: 9 Strand: +
Coding Region
   Position: hg38 chr8:93,700,648-93,728,297 Size: 27,650 Coding Exon Count: 9 

Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionRNA StructureOther Species
mRNA DescriptionsOther NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr8:93,700,593-93,728,389)mRNA (may differ from genome)Protein (288 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
ExonPrimerGeneCardsLynxMGIPubMedStanford SOURCE
UniProtKB

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 28.80 RPKM in Testis
Total median expression: 173.24 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -17.6055-0.320 Picture PostScript Text
3' UTR -7.4092-0.080 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Descriptions from all associated GenBank mRNAs
  BC014598 - Homo sapiens family with sequence similarity 92, member A1, mRNA (cDNA clone IMAGE:4826612), partial cds.
BC108707 - Homo sapiens family with sequence similarity 92, member A1, mRNA (cDNA clone IMAGE:6514757), partial cds.
CR627475 - Homo sapiens mRNA; cDNA DKFZp564I0278 (from clone DKFZp564I0278).
DQ327715 - Homo sapiens hypothetical protein HL1 mRNA, complete cds, alternatively spliced.
DQ327716 - Homo sapiens hypothetical protein HL2 mRNA, complete cds, alternatively spliced.
AK096298 - Homo sapiens cDNA FLJ38979 fis, clone NT2RI2004608.
CU677061 - Synthetic construct Homo sapiens gateway clone IMAGE:100018690 5' read FAM92A1 mRNA.
KJ903797 - Synthetic construct Homo sapiens clone ccsbBroadEn_13191 FAM92A1 gene, encodes complete protein.
JD042424 - Sequence 23448 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A087WTS3, DQ327716, uc064ony.1
UCSC ID: uc064ony.1
RefSeq Accession: NM_145269
CCDS: CCDS47892.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.