Human Gene HNRNPUL1 (ENST00000617305.4) Description and Page Index
  Description: heterogeneous nuclear ribonucleoprotein U like 1 (from HGNC HNRNPUL1)
RefSeq Summary (NM_007040): This gene encodes a nuclear RNA-binding protein of the heterogeneous nuclear ribonucleoprotein (hnRNP) family. This protein binds specifically to adenovirus early-1B-55kDa oncoprotein. It may play an important role in nucleocytoplasmic RNA transport, and its function is modulated by early-1B-55kDa in adenovirus-infected cells. [provided by RefSeq, Mar 2016].
Gencode Transcript: ENST00000617305.4
Gencode Gene: ENSG00000105323.17
Transcript (Including UTRs)
   Position: hg38 chr19:41,264,458-41,307,038 Size: 42,581 Total Exon Count: 3 Strand: +
Coding Region
   Position: hg38 chr19:41,264,504-41,305,854 Size: 41,351 Coding Exon Count: 2 

Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionRNA Structure
Other SpeciesmRNA DescriptionsOther NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:41,264,458-41,307,038)mRNA (may differ from genome)Protein (122 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblExonPrimerGeneCardsHGNCLynx
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-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 55.28 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 1512.97 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -31.9046-0.693 Picture PostScript Text
3' UTR -188.50603-0.313 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Descriptions from all associated GenBank mRNAs
  AK225850 - Homo sapiens mRNA for E1B-55kDa-associated protein 5 isoform a variant, clone: FCC125H07.
AK023006 - Homo sapiens cDNA FLJ12944 fis, clone NT2RP2005168, highly similar to Homo sapiens mRNA for E1B-55kDa-associated protein.
AJ007509 - Homo sapiens mRNA for E1B-55kDa-associated protein.
AK291762 - Homo sapiens cDNA FLJ78252 complete cds, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1 (HNRPUL1), transcript variant 1, mRNA.
AK127057 - Homo sapiens cDNA FLJ45114 fis, clone BRAWH3034775, highly similar to Homo sapiens E1B-55kDa-associated protein 5 (E1B-AP5).
AK022863 - Homo sapiens cDNA FLJ12801 fis, clone NT2RP2002099, highly similar to Heterogeneous nuclear ribonucleoprotein U-like protein 1.
AK308156 - Homo sapiens cDNA, FLJ98104.
BC009988 - Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA (cDNA clone MGC:16706 IMAGE:4127873), complete cds.
AK291315 - Homo sapiens cDNA FLJ78309 complete cds, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1 (HNRPUL1), transcript variant 1, mRNA.
BC002564 - Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA (cDNA clone MGC:1974 IMAGE:3139049), complete cds.
BC014232 - Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA (cDNA clone MGC:20910 IMAGE:4558792), complete cds.
BC027713 - Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA (cDNA clone MGC:16645 IMAGE:4123077), complete cds.
BC004242 - Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA (cDNA clone IMAGE:3619753), complete cds.
AB384748 - Synthetic construct DNA, clone: pF1KB3100, Homo sapiens HNRPUL1 gene for heterogeneous nuclear ribonucleoprotein U-like protein 1, complete cds, without stop codon, in Flexi system.
EU831487 - Synthetic construct Homo sapiens clone HAIB:100066516; DKFZo008H0517 heterogeneous nuclear ribonucleoprotein U-like 1 protein (HNRPUL1) gene, encodes complete protein.
EU831574 - Synthetic construct Homo sapiens clone HAIB:100066603; DKFZo004H0518 heterogeneous nuclear ribonucleoprotein U-like 1 protein (HNRPUL1) gene, encodes complete protein.
KJ898356 - Synthetic construct Homo sapiens clone ccsbBroadEn_07750 HNRNPUL1 gene, encodes complete protein.
KJ902200 - Synthetic construct Homo sapiens clone ccsbBroadEn_11594 HNRNPUL1 gene, encodes complete protein.
KJ906068 - Synthetic construct Homo sapiens clone ccsbBroadEn_15738 HNRNPUL1 gene, encodes complete protein.
AK290729 - Homo sapiens cDNA FLJ75163 complete cds, highly similar to Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1 (HNRPUL1), transcript variant 4, mRNA.
AK297127 - Homo sapiens cDNA FLJ56481 complete cds, highly similar to Heterogeneous nuclear ribonucleoprotein U-like protein 1.
KJ898355 - Synthetic construct Homo sapiens clone ccsbBroadEn_07749 HNRNPUL1 gene, encodes complete protein.
EU831452 - Synthetic construct Homo sapiens clone HAIB:100066481; DKFZo008E0417 heterogeneous nuclear ribonucleoprotein U-like 1 protein (HNRPUL1) gene, encodes complete protein.
EU831539 - Synthetic construct Homo sapiens clone HAIB:100066568; DKFZo004E0418 heterogeneous nuclear ribonucleoprotein U-like 1 protein (HNRPUL1) gene, encodes complete protein.
JD485294 - Sequence 466318 from Patent EP1572962.
JD075920 - Sequence 56944 from Patent EP1572962.
CU693286 - Synthetic construct Homo sapiens gateway clone IMAGE:100023203 5' read HNRPUL1 mRNA.
CU678042 - Synthetic construct Homo sapiens gateway clone IMAGE:100020484 5' read HNRPUL1 mRNA.
AL050146 - Homo sapiens mRNA; cDNA DKFZp586D0920 (from clone DKFZp586D0920).
AK001229 - Homo sapiens cDNA FLJ10367 fis, clone NT2RM2001424, highly similar to Heterogeneous nuclear ribonucleoprotein U-like protein 1.
AK021455 - Homo sapiens cDNA FLJ11393 fis, clone HEMBA1000591, weakly similar to PTB-ASSOCIATED SPLICING FACTOR.
JD407938 - Sequence 388962 from Patent EP1572962.
JD336550 - Sequence 317574 from Patent EP1572962.
JD089081 - Sequence 70105 from Patent EP1572962.
JD108824 - Sequence 89848 from Patent EP1572962.
JD359453 - Sequence 340477 from Patent EP1572962.
JD547131 - Sequence 528155 from Patent EP1572962.
JD415822 - Sequence 396846 from Patent EP1572962.
JD556611 - Sequence 537635 from Patent EP1572962.
BC000860 - Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA (cDNA clone IMAGE:3459524).
U55217 - Human RNA fragment from patients with Crohn's disease and ulcerative colitis.
JD520090 - Sequence 501114 from Patent EP1572962.
JD095178 - Sequence 76202 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A087X1I2, BC002564, uc060yzi.1
UCSC ID: uc060yzi.1
RefSeq Accession: NM_007040

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.