Human Gene ILDR2 (ENST00000526687.1) Description and Page Index
  Description: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. (from UniProt E9PRA4)
Gencode Transcript: ENST00000526687.1
Gencode Gene: ENSG00000143195.13
Transcript (Including UTRs)
   Position: hg38 chr1:166,918,866-166,975,482 Size: 56,617 Total Exon Count: 8 Strand: -
Coding Region
   Position: hg38 chr1:166,919,355-166,975,268 Size: 55,914 Coding Exon Count: 8 

Page IndexSequence and LinksUniProtKB CommentsMalaCardsCTDRNA-Seq Expression
Microarray ExpressionRNA StructureProtein StructureOther SpeciesmRNA DescriptionsOther Names
Methods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:166,918,866-166,975,482)mRNA (may differ from genome)Protein (531 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblExonPrimerGeneCardsHGNCLynx
MGIPubMedStanford SOURCEUniProtKB

-  Comments and Description Text from UniProtKB
  ID: E9PRA4_HUMAN
DESCRIPTION: SubName: Full=Immunoglobulin-like domain-containing receptor 2;
CAUTION: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.

-  MalaCards Disease Associations
  MalaCards Gene Search: ILDR2
Diseases sorted by gene-association score: deafness, autosomal recessive 42 (4), deafness, autosomal recessive 49 (2)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 8.41 RPKM in Testis
Total median expression: 42.49 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -115.80214-0.541 Picture PostScript Text
3' UTR -121.80489-0.249 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR013783 - Ig-like_fold
IPR003599 - Ig_sub

ModBase Predicted Comparative 3D Structure on E9PRA4
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Descriptions from all associated GenBank mRNAs
  DQ980600 - Homo sapiens C1orf32 mRNA, 5' UTR.
AF503509 - Homo sapiens C1orf32 putative protein mRNA, complete cds.
BC148432 - Synthetic construct Homo sapiens clone IMAGE:100015447, MGC:183040 immunoglobulin-like domain containing receptor 2 (ILDR2) mRNA, encodes complete protein.
AB527117 - Synthetic construct DNA, clone: pF1KE0046, Homo sapiens ILDR2 gene for immunoglobulin-like domain containing receptor 2, without stop codon, in Flexi system.
LF212850 - JP 2014500723-A/20353: Polycomb-Associated Non-Coding RNAs.
MA448427 - JP 2018138019-A/20353: Polycomb-Associated Non-Coding RNAs.
LF205436 - JP 2014500723-A/12939: Polycomb-Associated Non-Coding RNAs.
MA441013 - JP 2018138019-A/12939: Polycomb-Associated Non-Coding RNAs.
LF212848 - JP 2014500723-A/20351: Polycomb-Associated Non-Coding RNAs.
MA448425 - JP 2018138019-A/20351: Polycomb-Associated Non-Coding RNAs.
DQ980599 - Homo sapiens C1orf32 mRNA, 5' UTR.

-  Other Names for This Gene
  Alternate Gene Symbols: AF503509, E9PRA4, E9PRA4_HUMAN, uc057naj.1
UCSC ID: uc057naj.1
RefSeq Accession: NM_199351
Protein: E9PRA4

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.