Human Gene ESRP1 (ENST00000454170.7) Description and Page Index
Description: Homo sapiens epithelial splicing regulatory protein 1 (ESRP1), transcript variant 5, mRNA. (from RefSeq NM_001122827)
RefSeq Summary (NM_001122827): ESPR1 is an epithelial cell-type-specific splicing regulator (Warzecha et al., 2009 [PubMed 19285943]).[supplied by OMIM, Aug 2009].
Gencode Transcript: ENST00000454170.7
Gencode Gene: ENSG00000104413.18
Transcript (Including UTRs)
Position: hg38 chr8:94,641,204-94,707,466 Size: 66,263 Total Exon Count: 14 Strand: +
Position: hg38 chr8:94,641,319-94,705,931 Size: 64,613 Coding Exon Count: 14
Data last updated: 2019-09-04
Sequence and Links to Tools and Databases
MalaCards Disease Associations
Comparative Toxicogenomics Database (CTD)
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
BX647570 - Homo sapiens mRNA; cDNA DKFZp313K1811 (from clone DKFZp313K1811). BC099916 - Homo sapiens epithelial splicing regulatory protein 1, mRNA (cDNA clone MGC:104725 IMAGE:30527936), complete cds. BC067098 - Homo sapiens epithelial splicing regulatory protein 1, mRNA (cDNA clone MGC:71203 IMAGE:6586195), complete cds. BC019932 - Homo sapiens epithelial splicing regulatory protein 1, mRNA (cDNA clone IMAGE:4991420), partial cds. BC052574 - Homo sapiens cDNA clone IMAGE:6586439, containing frame-shift errors. KJ899023 - Synthetic construct Homo sapiens clone ccsbBroadEn_08417 ESRP1 gene, encodes complete protein. KJ906202 - Synthetic construct Homo sapiens clone ccsbBroadEn_15872 ESRP1 gene, encodes complete protein. BC035406 - Homo sapiens RNA binding motif protein 35A, mRNA (cDNA clone IMAGE:4526804). AK000178 - Homo sapiens cDNA FLJ20171 fis, clone COL09761. BC101621 - Homo sapiens cDNA clone IMAGE:8069127. BC112043 - Homo sapiens epithelial splicing regulatory protein 1, mRNA (cDNA clone IMAGE:8327511), partial cds. AK001805 - Homo sapiens cDNA FLJ10943 fis, clone OVARC1001360. JD128657 - Sequence 109681 from Patent EP1572962. JD537460 - Sequence 518484 from Patent EP1572962. JD053308 - Sequence 34332 from Patent EP1572962. JD062521 - Sequence 43545 from Patent EP1572962. JD359486 - Sequence 340510 from Patent EP1572962. JD187186 - Sequence 168210 from Patent EP1572962. BX641160 - Homo sapiens mRNA; cDNA DKFZp686M05238 (from clone DKFZp686M05238). JD267733 - Sequence 248757 from Patent EP1572962. JD306787 - Sequence 287811 from Patent EP1572962. JD297726 - Sequence 278750 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: A0A2U3TZN9, NM_001122827, uc286aug.1 UCSC ID: uc286aug.1 RefSeq Accession: NM_001122827
Methods, Credits, and Use Restrictions
for details on how this gene model was made and data restrictions if any.