Human Gene NOSTRIN (ENST00000445023.6) Description and Page Index
  Description: Homo sapiens nitric oxide synthase trafficking (NOSTRIN), transcript variant 1, mRNA. (from RefSeq NM_052946)
RefSeq Summary (NM_052946): Nitric oxide (NO) is a potent mediator in biologic processes such as neurotransmission, inflammatory response, and vascular homeostasis. NOSTRIN binds the enzyme responsible for NO production, endothelial NO synthase (ENOS; MIM 163729), and triggers the translocation of ENOS from the plasma membrane to vesicle-like subcellular structures, thereby attenuating ENOS-dependent NO production.[supplied by OMIM, Apr 2004].
Gencode Transcript: ENST00000445023.6
Gencode Gene: ENSG00000163072.15
Transcript (Including UTRs)
   Position: hg38 chr2:168,802,597-168,865,054 Size: 62,458 Total Exon Count: 15 Strand: +
Coding Region
   Position: hg38 chr2:168,828,195-168,864,970 Size: 36,776 Coding Exon Count: 13 

Page IndexSequence and LinksUniProtKB CommentsMalaCardsCTDRNA-Seq Expression
Microarray ExpressionRNA StructureProtein StructureOther SpeciesGO AnnotationsmRNA Descriptions
PathwaysOther NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:168,802,597-168,865,054)mRNA (may differ from genome)Protein (428 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerGeneCardsHGNC
LynxMGIneXtProtOMIMPubMedReactome
Stanford SOURCEUniProtKB

-  Comments and Description Text from UniProtKB
  ID: NOSTN_HUMAN
DESCRIPTION: RecName: Full=Nostrin; AltName: Full=BM247 homolog; AltName: Full=Nitric oxide synthase traffic inducer; AltName: Full=Nitric oxide synthase trafficker; AltName: Full=eNOS-trafficking inducer;
FUNCTION: Multivalent adapter protein which may decrease NOS3 activity by inducing its translocation away from the plasma membrane.
SUBUNIT: Homotrimer. Interacts with DAB2 (By similarity). Interacts with NOS3, DNM2, WASL and CAV1.
INTERACTION: P29474:NOS3; NbExp=7; IntAct=EBI-1391643, EBI-1391623;
SUBCELLULAR LOCATION: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasmic vesicle. Cytoplasm, cytoskeleton. Note=Enriched in selected actin structures.
TISSUE SPECIFICITY: Expressed at highest levels in heart, kidney, placenta and lung, and at lowest levels in brain, thymus and spleen. Present in vascular endothelial cells and placenta. Over- expressed in placenta from women with pre-eclampsia (at protein level).
DOMAIN: The SH3 domain mediates interaction with NOS3, DNM2 and WASL.
DOMAIN: The FCH domain is necessary for membrane targeting.
SIMILARITY: Contains 1 FCH domain.
SIMILARITY: Contains 1 SH3 domain.

-  MalaCards Disease Associations
  MalaCards Gene Search: NOSTRIN
Diseases sorted by gene-association score: pre-eclampsia (5), eclampsia (4)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene
  • D013749 Tetrachlorodibenzodioxin
  • C111118 2',3,3',4',5-pentachloro-4-hydroxybiphenyl
  • C016403 2,4-dinitrotoluene
  • C023514 2,6-dinitrotoluene
  • C548651 2-(1'H-indolo-3'-carbonyl)thiazole-4-carboxylic acid methyl ester
  • C547126 AZM551248
  • D000393 Air Pollutants
  • D000643 Ammonium Chloride
  • D006861 Hydrogen Peroxide
  • D018817 N-Methyl-3,4-methylenedioxyamphetamine
          more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 13.60 RPKM in Lung
Total median expression: 237.74 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -51.90198-0.262 Picture PostScript Text
3' UTR -9.8084-0.117 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR001060 - FCH
IPR001452 - SH3_domain

Pfam Domains:
PF00611 - Fes/CIP4, and EFC/F-BAR homology domain
PF00018 - SH3 domain

Protein Data Bank (PDB) 3-D Structure
MuPIT help

2YUN
- NMR MuPIT


ModBase Predicted Comparative 3D Structure on Q8IVI9
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003677 DNA binding
GO:0005515 protein binding

Biological Process:
GO:0006897 endocytosis
GO:0045892 negative regulation of transcription, DNA-templated
GO:0050999 regulation of nitric-oxide synthase activity

Cellular Component:
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005856 cytoskeleton
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016607 nuclear speck
GO:0030666 endocytic vesicle membrane
GO:0031410 cytoplasmic vesicle


-  Descriptions from all associated GenBank mRNAs
  AK093444 - Homo sapiens cDNA FLJ36125 fis, clone TESTI2024422, highly similar to Homo sapiens nitric oxide synthase trafficker (NOSTRIN), transcript variant 2, mRNA.
AX748130 - Sequence 1655 from Patent EP1308459.
BC014189 - Homo sapiens nitric oxide synthase trafficker, mRNA (cDNA clone MGC:20702 IMAGE:4650302), complete cds.
AK002203 - Homo sapiens cDNA FLJ11341 fis, clone PLACE1010786, highly similar to Mus musculus nitric oxide synthase trafficker.
AK290254 - Homo sapiens cDNA FLJ77038 complete cds, highly similar to Homo sapiens nitric oxide synthase trafficker, transcript variant 2, mRNA.
BC093072 - Homo sapiens nitric oxide synthase trafficker, mRNA (cDNA clone MGC:111205 IMAGE:30327154), complete cds.
AJ532842 - Homo sapiens mRNA for NOSTRIN protein.
DQ402497 - Homo sapiens nostrin mRNA, complete cds, alternatively spliced.
JD561791 - Sequence 542815 from Patent EP1572962.
JD499270 - Sequence 480294 from Patent EP1572962.
CU680820 - Synthetic construct Homo sapiens gateway clone IMAGE:100017654 5' read NOSTRIN mRNA.
AB590237 - Synthetic construct DNA, clone: pFN21AE1450, Homo sapiens NOSTRIN gene for nitric oxide synthase trafficker, without stop codon, in Flexi system.
DQ896126 - Synthetic construct Homo sapiens clone IMAGE:100010586; FLH190548.01L; RZPDo839B0766D nitric oxide synthase trafficker (NOSTRIN) gene, encodes complete protein.
DQ892671 - Synthetic construct clone IMAGE:100005301; FLH190552.01X; RZPDo839B0776D nitric oxide synthase trafficker (NOSTRIN) gene, encodes complete protein.
AK123698 - Homo sapiens cDNA FLJ41704 fis, clone HLUNG2001996.
JD274447 - Sequence 255471 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q8IVI9 (Reactome details) participates in the following event(s):

R-HSA-203716 eNOS:Caveolin-1 complex binds to Nostrin
R-HSA-203565 eNOS:Caveolin-1:NOSTRIN:dynamin-2 complex binds N-WASP
R-HSA-203662 eNOS:Caveolin-1:NOSTRIN complex binds dynamin-2
R-HSA-203641 NOSTRIN mediated eNOS trafficking
R-HSA-203765 eNOS activation and regulation
R-HSA-202131 Metabolism of nitric oxide
R-HSA-1430728 Metabolism

-  Other Names for This Gene
  Alternate Gene Symbols: A8K2I9, NM_052946, NOSTN_HUMAN, Q27HG3, Q53S62, Q8IVI9, Q96CJ9, uc002ueh.1, uc002ueh.2, uc002ueh.3, uc002ueh.4
UCSC ID: uc002ueh.4
RefSeq Accession: NM_052946
Protein: Q8IVI9 (aka NOSTN_HUMAN)
CCDS: CCDS42772.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.