Human Gene NCKAP5 (ENST00000405974.7) Description and Page Index
  Description: NCK associated protein 5 (from HGNC NCKAP5)
Gencode Transcript: ENST00000405974.7
Gencode Gene: ENSG00000176771.17
Transcript (Including UTRs)
   Position: hg38 chr2:132,671,800-133,568,460 Size: 896,661 Total Exon Count: 19 Strand: -
Coding Region
   Position: hg38 chr2:132,673,289-133,517,526 Size: 844,238 Coding Exon Count: 17 

Page IndexSequence and LinksMalaCardsCTDRNA-Seq ExpressionRNA Structure
Other SpeciesmRNA DescriptionsOther NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:132,671,800-133,568,460)mRNA (may differ from genome)Protein (590 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblExonPrimerGeneCardsHGNCLynx
MGIPubMedStanford SOURCEUniProtKB

-  MalaCards Disease Associations
  MalaCards Gene Search: NCKAP5
Diseases sorted by gene-association score: hypersomnia (5)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 2.24 RPKM in Lung
Total median expression: 23.00 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -103.40374-0.276 Picture PostScript Text
3' UTR -330.501489-0.222 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Descriptions from all associated GenBank mRNAs
  BC172401 - Synthetic construct Homo sapiens clone IMAGE:100069095, MGC:199106 Nck-associated protein 5 (NAP5) mRNA, encodes complete protein.
AK092189 - Homo sapiens cDNA FLJ34870 fis, clone NT2NE2014651.
AX747399 - Sequence 924 from Patent EP1308459.
BC110831 - Homo sapiens Nck-associated protein 5, mRNA (cDNA clone IMAGE:6067662), partial cds.
AK057980 - Homo sapiens cDNA FLJ25251 fis, clone STM03603.
AK124659 - Homo sapiens cDNA FLJ42668 fis, clone BRAMY2020270.
AY946007 - Homo sapiens peripheral clock protein 1 (ERIH1) mRNA, complete cds.
AY946008 - Homo sapiens peripheral clock protein 2 (ERIH2) mRNA, complete cds.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A0A0MSE4, AK124659, uc061nxt.1
UCSC ID: uc061nxt.1
RefSeq Accession: NM_207481
CCDS: CCDS46417.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.