Human Gene TRDJ1 (ENST00000390473.1) Description and Page Index
  Description: T cell receptor delta joining 1 (from HGNC TRDJ1)
Gencode Transcript: ENST00000390473.1
Gencode Gene: ENSG00000211825.1
Transcript (Including UTRs)
   Position: hg38 chr14:22,450,089-22,450,139 Size: 51 Total Exon Count: 1 Strand: +
Coding Region
   Position: hg38 chr14:22,450,089-22,450,139 Size: 51 Coding Exon Count: 1 

Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr14:22,450,089-22,450,139)mRNA (may differ from genome)Protein (16 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaEnsemblExonPrimer
GeneCardsHGNCLynxMGIneXtProtPubMed
Stanford SOURCEUniProtKB

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.00 RPKM in Adipose - Subcutaneous
Total median expression: 0.00 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  KP676377 - Homo sapiens clone BCT cl81 T cell receptor alpha chain (TRA) mRNA, partial cds.
AB976978 - Homo sapiens mRNA for T cell receptor alpha chain V-J-region, partial cds, isolate: N(2)-TRA168.
MG790569 - Homo sapiens isolate Sample3_Cell129_2D2_CDR3a T-cell receptor alpha chain mRNA, partial sequence.
MG789911 - Homo sapiens isolate Sample2_Cell79_1G10_CDR3a T-cell receptor alpha chain mRNA, partial sequence.
MG790700 - Homo sapiens isolate Sample3_Cell188_3D1_CDR3a T-cell receptor alpha chain mRNA, partial sequence.
KM004104 - Homo sapiens clone 79 T cell receptor beta mRNA, partial cds.
KM004386 - Homo sapiens clone 361 T cell receptor alpha mRNA, partial cds.
AY135853 - Homo sapiens clone PSA.S.8 T-cell receptor alpha chain mRNA, partial cds.
MG790943 - Homo sapiens isolate Sample3_Cell293_9C6_CDR3a2 T-cell receptor alpha chain mRNA, partial sequence.
M21624 - Human T-cell receptor delta chain mRNA (VJC-region), complete cds.
MG789368 - Homo sapiens isolate Sample1_Cell165_12G10_CDR3a2 T-cell receptor alpha chain mRNA, partial sequence.
U83989 - Human T cell receptor alpha chain mRNA, partial cds.
BC022317 - Homo sapiens T cell receptor alpha locus, mRNA (cDNA clone MGC:22624 IMAGE:4732634), complete cds.
X14545 - Human KT10E mRNA for T-cell receptor delta-chain V(delta)1-N1-D(delta)1-N2-D(delta)2-N3-J(delta)3.
AK301274 - Homo sapiens cDNA FLJ53668 complete cds.
X06557 - Human mRNA for TCR-delta chain.
KJ901787 - Synthetic construct Homo sapiens clone ccsbBroadEn_11181 TRA@ gene, encodes complete protein.
AY357942 - Homo sapiens T cell receptor delta-chain mRNA, complete cds; alternatively spliced.
M18414 - Human T-cell receptor-delta mRNA, 3' end.
AM408119 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate CGw2.
AM408118 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate CGw1.
AM408120 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate DJh1.
AM408121 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate DJh2.
AM408122 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate JHs.
AM408124 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate LHl2.
AM408125 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate LHz1.
AM408126 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate LHz2.
AM408127 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate MF1.
AM408128 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate MF2.
AM408129 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate MM.
AM408130 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate MY1.
AM408131 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate MY2.
AM408132 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate MZj1.
AM408133 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate MZj2.
AM408134 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate NQg1.
AM408135 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate NQg2.
AM408136 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV1 gene), isolate ZCj.
AJ583015 - Homo sapiens partial mRNA for TCRD (T-cell receptor delta chain gene), clone 16.1.2.Wendy.
X15021 - Human CII mRNA for T-cell receptor delta (D105).
S73843 - Homo sapiens T-cell receptor delta chain mRNA, partial cds.
S60177 - TCR V1-J-C delta =T cell receptor delta chain variable {V-J junction} [human, mRNA Mutant, 244 nt].
AF366499 - Homo sapiens clone 50-2 T T-cell receptor V delta 1 mRNA, partial cds.
AF366497 - Homo sapiens clone 50-2 N T-cell receptor V delta 1 mRNA, partial cds.
AF366498 - Homo sapiens clone 50-2 B T-cell receptor V delta 1 mRNA, partial cds.
AF366502 - Homo sapiens clone 53-1 T T-cell receptor V delta 1 mRNA, partial cds.
AF366515 - Homo sapiens clone 60-1 T T-cell receptor V delta 1 mRNA, partial cds.
AF366516 - Homo sapiens clone 60-1 BL T-cell receptor V delta 1 mRNA, partial cds.
AF366483 - Homo sapiens clone 22-2 N T-cell receptor V delta 1 mRNA, partial cds.
AF366505 - Homo sapiens clone 53-2 T T-cell receptor V delta 1 mRNA, partial cds.
U91143 - Homo sapiens T-cell receptor delta chain (TCRDV1J1) mRNA, partial cds.
AF451697 - Homo sapiens isolate I5164 T-cell receptor delta chain (TRD@) mRNA, partial cds.
AF451700 - Homo sapiens isolate K5755 T-cell receptor delta chain (TRD@) mRNA, partial cds.
AF459591 - Homo sapiens isolate RK034 T cell receptor delta chain (TRD@) mRNA, partial cds.
AF459592 - Homo sapiens isolate DW105 T cell receptor delta chain (TRD@) mRNA, partial cds.
EF656632 - Homo sapiens clone DC1 T cell receptor delta chain variable region (TRCDV1) mRNA, partial cds.
L41406 - Homo sapiens (clone WIG cp 5.38) T-cell receptor delta (TCRD) mRNA, partial cds.
AK303107 - Homo sapiens cDNA FLJ55266 complete cds, highly similar to T-cell receptor alpha chain V region CTL-L17 precursor.
X14548 - Human KT08A mRNA for T-cell receptor delta-chain V(delta)5-N1-D(delta)1-N2-D(delta)2-N3-J(delta)3.
AK303091 - Homo sapiens cDNA FLJ55265 complete cds.
AK303149 - Homo sapiens cDNA FLJ52576 complete cds.
AK301085 - Homo sapiens cDNA FLJ54555 complete cds.
X13950 - Human mRNA for rearranged T-cell receptor delta-chain (LB117) V(delta)2-D(delta)1-D(delta)2-J(delta)1.
X14546 - Human KT19E mRNA for T-cell receptor delta-chain V(delta)2-D(delta)1-N2-D(delta)2-N3-J(delta)3.
X14547 - Human KT14E mRNA for T-cell receptor delta-chain V(delta)2-D(delta)1-N2-D(delta)2-N3-J(delta)3.
X53849 - H.sapiens mRNA for T-cell receptor V delta 2, J delta 1 and C delta (partial) regions.
X72501 - H.sapiens mRNA for soluble delta TCR.
AY312956 - Homo sapiens T-cell receptor delta chain 37HE mRNA, complete cds.
AY312957 - Homo sapiens T-cell receptor delta chain 37HA mRNA, complete cds.
AY312958 - Homo sapiens T-cell receptor delta chain HE/801 mRNA, complete cds.
AY312959 - Homo sapiens T-cell receptor delta chain HA/801 mRNA, complete cds.
KC196073 - Homo sapiens T-cell antigen receptor mRNA, complete cds.
X13951 - Human mRNA for rearranged T-cell receptor delta-chain (LB210) V(delta)2-D(delta)1-D(delta)2-J(delta)1.
AF512433 - Homo sapiens clone D1.3 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512434 - Homo sapiens clone D1.19 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512435 - Homo sapiens clone D1.18 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512436 - Homo sapiens clone D1.16 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512438 - Homo sapiens clone D1.13 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512440 - Homo sapiens clone D1.11 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512441 - Homo sapiens clone D1.4 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512442 - Homo sapiens clone D1.8 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512443 - Homo sapiens clone D1.9 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512444 - Homo sapiens clone D1.6 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AF512446 - Homo sapiens clone D1.5 T-cell receptor delta TRDV2*03/TRDD3*01/TRDJ1*01 mRNA, partial cds.
AM408148 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate LHl2.
AM408137 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate CGw1.
AM408138 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate CGw2.
AM408141 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate DSz1.
AM408143 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate JHs1.
AM408144 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate JHs2.
AM408145 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate LH1.
AM408147 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate LHl1.
AM408149 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate LHl3.
AM408150 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate LHl4.
AM408152 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate LHz2.
AM408153 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate MF.
AM408154 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate MM1.
AM408155 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate MM.
AM408156 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate MY1.
AM408157 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate MY2.
AM408158 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate MZj1.
AM408159 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate MZj2.
AM408161 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate NQg2.
AM408162 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate SJ1.
AM408164 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate SJ3.
AM408165 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate TGy.
AM408166 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate ZCj1.
AM408167 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate ZCj2.
AM408168 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate ZW.
AM408169 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate ZZj1.
AJ583013 - Homo sapiens partial mRNA for T-cell receptor delta chain (TCRD gene), clone 15.1.21.Bob.
AM408170 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate ZZj2.
AM408140 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate CXj.
AM408146 - Homo sapiens partial mRNA for T cell receptor delta chain variable region (TCRDV2 gene), isolate LH2.
JQ956404 - Homo sapiens T cell receptor delta chain mRNA, partial cds.
U91025 - Homo sapiens clone FE1225 T-cell receptor delta chain (TCRDV2J1) mRNA, partial cds.
AF459595 - Homo sapiens isolate RK258 T cell receptor delta chain (TRD@) mRNA, partial cds.
L41400 - Homo sapiens (clone TIS-cp 1.21) T-cell receptor delta (TCRD) mRNA, partial cds.
X73617 - H.sapiens mRNA for T-cell receptor delta.
Y00736 - Human mRNA for T-cell receptor delta-chain.
S69663 - TCR J delta 1/C delta=T-cell receptor CD3 surface protein {alternatively spliced} [human, malaria patient, peripheral blood mononuclear cells, mRNA Partial Mutant, 96 nt].
AF366514 - Homo sapiens clone 60-1 B T-cell receptor V delta 1 mRNA, partial cds.
AF366513 - Homo sapiens clone 60-1 N T-cell receptor V delta 1 mRNA, partial cds.
AF366494 - Homo sapiens clone 50-1 B T-cell receptor V delta 1 mRNA, partial cds.
AF366495 - Homo sapiens clone 50-1 T T-cell receptor V delta 1 mRNA, partial cds.
AF364080 - Homo sapiens clone 22-1 B T cell receptor V delta 1 mRNA, partial cds.
AF366500 - Homo sapiens clone 53-1 N T-cell receptor V delta 1 mRNA, partial cds.
AF364079 - Homo sapiens clone 22-1 N T cell receptor V delta 1 mRNA, partial cds.
AF366501 - Homo sapiens clone 53-1 B T-cell receptor V delta 1 mRNA, partial cds.
AF364081 - Homo sapiens clone 22-1_T T cell receptor V delta 1 mRNA, partial cds.
AK301114 - Homo sapiens cDNA FLJ56790 complete cds.
AF366492 - Homo sapiens clone 40-2 T T-cell receptor V delta 1 mRNA, partial cds.
AF366490 - Homo sapiens clone 40-2 N T-cell receptor V delta 1 mRNA, partial cds.
AF366488 - Homo sapiens clone 40-1T T-cell receptor V delta 1 mRNA, partial cds.
AF366509 - Homo sapiens clone 56-1 BL T-cell receptor V delta 1 mRNA, partial cds.
AF366508 - Homo sapiens clone 56-1 T T-cell receptor V delta 1 mRNA, partial cds.
AF366487 - Homo sapiens clone 40-1B T-cell receptor V delta 1 mRNA, partial cds.
AF366491 - Homo sapiens clone 40-2 B T-cell receptor V delta 1 mRNA, partial cds.
AF366507 - Homo sapiens clone 56-1 N T-cell receptor V delta 1 mRNA, partial cds.
AF366493 - Homo sapiens clone 50-1 N T-cell receptor V delta 1 mRNA, partial cds.
AF366517 - Homo sapiens clone 60-2 N T-cell receptor V delta 1 mRNA, partial cds.
AF366518 - Homo sapiens clone 60-2 B T-cell receptor V delta 1 mRNA, partial cds.
AF366519 - Homo sapiens clone 60-2 T T-cell receptor V delta 1 mRNA, partial cds.
AF366506 - Homo sapiens clone 53-2 BL T-cell receptor V delta 1 mRNA, partial cds.
AF366496 - Homo sapiens clone 50-1 BL T-cell receptor V delta 1 mRNA, partial cds.
AF366484 - Homo sapiens clone 22-2 B T-cell receptor V delta 1 mRNA, partial cds.
AF366511 - Homo sapiens clone 56-2 B T-cell receptor V delta 1 mRNA, partial cds.
AF366510 - Homo sapiens clone 56-2 N T-cell receptor V delta 1 mRNA, partial cds.
AF366512 - Homo sapiens clone 56-2 T T-cell receptor V delta 1 mRNA, partial cds.
AF366489 - Homo sapiens clone 40-1BL T-cell receptor V delta 1 mRNA, partial cds.
AF366486 - Homo sapiens clone 40-1N T-cell receptor V delta 1 mRNA, partial cds.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A075B706, S69663, uc058zfe.1
UCSC ID: uc058zfe.1
Representative RNA: S69663

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.