Human Gene ZNF511-PRAP1 (ENST00000368554.8) Description and Page Index
  Description: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. (from UniProt H7BY64)
Gencode Transcript: ENST00000368554.8
Gencode Gene: ENSG00000283496.1
Transcript (Including UTRs)
   Position: hg38 chr10:133,309,410-133,352,529 Size: 43,120 Total Exon Count: 8 Strand: +
Coding Region
   Position: hg38 chr10:133,309,410-133,352,440 Size: 43,031 Coding Exon Count: 8 

Page IndexSequence and LinksUniProtKB CommentsRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsOther NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:133,309,410-133,352,529)mRNA (may differ from genome)Protein (315 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
ExonPrimerGeneCardsHGNCLynxMGIPubMed
Stanford SOURCEUniProtKB

-  Comments and Description Text from UniProtKB
  ID: H7BY64_HUMAN
DESCRIPTION: SubName: Full=Zinc finger protein 511;
CAUTION: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
3' UTR -33.9089-0.381 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR007087 - Znf_C2H2
IPR015880 - Znf_C2H2-like
IPR013087 - Znf_C2H2/integrase_DNA-bd

ModBase Predicted Comparative 3D Structure on H7BY64
FrontTopSide
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003676 nucleic acid binding


-  Descriptions from all associated GenBank mRNAs
  BC015139 - Homo sapiens zinc finger protein 511, mRNA (cDNA clone IMAGE:4040789), partial cds.
BC019897 - Homo sapiens zinc finger protein 511, mRNA (cDNA clone MGC:30006 IMAGE:5123355), complete cds.
AK091711 - Homo sapiens cDNA FLJ34392 fis, clone HCHON2000265.
AX747142 - Sequence 667 from Patent EP1308459.
AK292380 - Homo sapiens cDNA FLJ78327 complete cds.
JF432478 - Synthetic construct Homo sapiens clone IMAGE:100073699 zinc finger protein 511 (ZNF511) gene, encodes complete protein.
KJ895336 - Synthetic construct Homo sapiens clone ccsbBroadEn_04730 ZNF511 gene, encodes complete protein.
EU937518 - Homo sapiens ZNF511/PRAP1 fusion protein mRNA, complete cds.
AY358908 - Homo sapiens clone DNA65412 proline-rich acidic protein (UNQ608) mRNA, complete cds.
BC143591 - Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone MGC:177119 IMAGE:9052102), complete cds.
BC093853 - Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone MGC:120888 IMAGE:7939698), complete cds.
BC101743 - Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone MGC:126792 IMAGE:8069249), complete cds.
BC143590 - Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone MGC:177118 IMAGE:9052101), complete cds.
BC143592 - Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone MGC:177120 IMAGE:9052103), complete cds.
AF421885 - Homo sapiens proline-rich acidic protein mRNA, complete cds.
GU727628 - Homo sapiens epididymis tissue protein Li 178 mRNA, complete cds.
BC061643 - Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone MGC:74605 IMAGE:5748898), complete cds.
BC071872 - Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone MGC:88545 IMAGE:6284088), complete cds.
GQ891511 - Homo sapiens clone HEL-S-232 epididymis secretory sperm binding protein mRNA, complete cds.
CU687188 - Synthetic construct Homo sapiens gateway clone IMAGE:100023079 5' read PRAP1 mRNA.
HQ447527 - Synthetic construct Homo sapiens clone IMAGE:100070866; CCSB014957_01 proline-rich acidic protein 1 (PRAP1) gene, encodes complete protein.
KJ900059 - Synthetic construct Homo sapiens clone ccsbBroadEn_09453 PRAP1 gene, encodes complete protein.
DQ884405 - Homo sapiens clone BFC06036 proline-rich acidic protein 1 mRNA, complete cds.
AY158074 - Homo sapiens proline-rich acidic protein variant mRNA, complete cds; alternatively spliced.
AF123768 - Homo sapiens proline-rich acidic protein mRNA, complete cds.
BC029447 - Homo sapiens proline-rich acidic protein 1, mRNA (cDNA clone IMAGE:4712910), partial cds.
JD191052 - Sequence 172076 from Patent EP1572962.
JD215410 - Sequence 196434 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: EU937518, H7BY64, H7BY64_HUMAN, uc021qbf.1, uc021qbf.2, uc021qbf.3, ZNF511
UCSC ID: uc021qbf.3
RefSeq Accession: NM_145202
Protein: H7BY64

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.